BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C10SP1|AL425839
(816 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1610 0.0
>3x_Contig1783
Length = 22123
Score = 1610 bits (812), Expect = 0.0
Identities = 815/816 (99%)
Strand = Plus / Plus
Query: 1 atgtatacggtataactgaagagtagagtggcgattgcaatagccaagttgtctttttgt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14043 atgtatacggtataattgaagagtagagtggcgattgcaatagccaagttgtctttttgt 14102
Query: 61 tgaggtttgcaatttggataatcaccgtccaatatttggaacacggaatcgtacaatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14103 tgaggtttgcaatttggataatcaccgtccaatatttggaacacggaatcgtacaatgct 14162
Query: 121 ggcttacccatgagctctttcccccaaatttggttagagaaacagttggctaacattctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14163 ggcttacccatgagctctttcccccaaatttggttagagaaacagttggctaacattctt 14222
Query: 181 gtagttagcattgtagagattggattttcttgtgaaagtccttcctcgataaactcactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14223 gtagttagcattgtagagattggattttcttgtgaaagtccttcctcgataaactcactc 14282
Query: 241 atgtcgtcacttgaaggtaactttggggttagaattctaactatatcgtatgcgggtgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14283 atgtcgtcacttgaaggtaactttggggttagaattctaactatatcgtatgcgggtgtt 14342
Query: 301 ttgttccccttccattgatttttaatgatgcatgcatgcgcatacaatagttcaatgttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14343 ttgttccccttccattgatttttaatgatgcatgcatgcgcatacaatagttcaatgttg 14402
Query: 361 ttttccacatcgtgcaaagctgaaccgattgccccaagtgcgtcatcgtcaaaggtattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14403 ttttccacatcgtgcaaagctgaaccgattgccccaagtgcgtcatcgtcaaaggtattt 14462
Query: 421 tctgcctgattaagtttcacaataccattgaacaaagaatctgggttgaaagatgtaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14463 tctgcctgattaagtttcacaataccattgaacaaagaatctgggttgaaagatgtaagt 14522
Query: 481 tttaggtacttcttcacggggaatatcttataattgacgtctgcatgtctggaaatatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14523 tttaggtacttcttcacggggaatatcttataattgacgtctgcatgtctggaaatatca 14582
Query: 541 gaaggttgatctaatgtagtcgacttagtatttgtcacaatgaattggacaatttgatcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14583 gaaggttgatctaatgtagtcgacttagtatttgtcacaatgaattggacaatttgatcc 14642
Query: 601 ttataacttgttggcaactcgtatctaattatgaatttatctgcaacatcgtacggatta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14643 ttataacttgttggcaactcgtatctaattatgaatttatctgcaacatcgtacggatta 14702
Query: 661 tcgtttgcattgacgggtagtttcaacggtggtttgccttcttcgatgtcaacatcaaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14703 tcgtttgcattgacgggtagtttcaacggtggtttgccttcttcgatgtcaacatcaaac 14762
Query: 721 acgaaatcgtaattcttaccctcatattcaaccttattatcgctaccggcagatgaaaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14763 acgaaatcgtaattcttaccctcatattcaaccttattatcgctaccggcagatgaaaca 14822
Query: 781 acgtctccgactttactccaagaacctcccgtgaac 816
||||||||||||||||||||||||||||||||||||
Sbjct: 14823 acgtctccgactttactccaagaacctcccgtgaac 14858
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5614
Number of Sequences: 1807
Number of extensions: 5614
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 816
length of database: 10,358,551
effective HSP length: 16
effective length of query: 800
effective length of database: 10,329,639
effective search space: 8263711200
effective search space used: 8263711200
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)